Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 AL356652.1-201ENST00000615962 565 ntBASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 FZD10-202ENST00000539839 3282 ntBASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
MBD3L1Q8WWY6 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 AL512353.2-201ENST00000448759 1962 ntBASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
MBD3L1Q8WWY6 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 AC243732.1-201ENST00000612648 864 ntBASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MBD3L1Q8WWY6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 KRT87P-202ENST00000534226 1464 ntBASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 ABALON-201ENST00000629058 1903 ntBASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
MBD3L1Q8WWY6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms