Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 AC016405.3-201ENST00000607710 860 ntBASIC16.85■□□□□ 0.29
CCDC107Q8WV48 AL356652.1-201ENST00000615962 565 ntBASIC16.85■□□□□ 0.29
CCDC107Q8WV48 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CCDC107Q8WV48 PKD1P1-201ENST00000458669 6805 ntBASIC16.84■□□□□ 0.29
CCDC107Q8WV48 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 BX119927.1-201ENST00000636596 1552 ntBASIC16.84■□□□□ 0.29
CCDC107Q8WV48 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CCDC107Q8WV48 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC107Q8WV48 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
CCDC107Q8WV48 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC107Q8WV48 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 PGM5P4-201ENST00000421970 445 ntBASIC16.83■□□□□ 0.28
CCDC107Q8WV48 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 AC013268.1-206ENST00000638368 961 ntBASIC16.83■□□□□ 0.28
CCDC107Q8WV48 AC112229.1-201ENST00000639295 961 ntBASIC16.83■□□□□ 0.28
CCDC107Q8WV48 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC107Q8WV48 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CCDC107Q8WV48 CYP21A1P-202ENST00000354927 1481 ntBASIC16.82■□□□□ 0.28
CCDC107Q8WV48 AC087633.2-202ENST00000565166 1439 ntBASIC16.82■□□□□ 0.28
CCDC107Q8WV48 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms