Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.14■□□□□ 0.82
PCDH19Q8TAB3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 AC098590.1-201ENST00000468126 897 ntBASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 AC026366.1-201ENST00000488803 879 ntBASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 AC093827.2-201ENST00000512654 315 ntBASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.14■□□□□ 0.81
PCDH19Q8TAB3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 KRT18P16-201ENST00000510337 1294 ntBASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 AC233263.1-201ENST00000578059 224 ntBASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PCDH19Q8TAB3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 AC128676.1-201ENST00000454392 318 ntBASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH19Q8TAB3 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 KRT8P8-201ENST00000434750 1448 ntBASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PCDH19Q8TAB3 ZNF815P-204ENST00000434898 1737 ntBASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH19Q8TAB3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms