Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
NUP35Q8NFH5 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 AC007322.3-201ENST00000426526 701 ntBASIC14.57□□□□□ -0.08
NUP35Q8NFH5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.57□□□□□ -0.08
NUP35Q8NFH5 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 AC093525.10-201ENST00000625130 1569 ntBASIC14.56□□□□□ -0.08
NUP35Q8NFH5 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 AC141586.3-201ENST00000562166 1838 ntBASIC14.56□□□□□ -0.08
NUP35Q8NFH5 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 KRT16P6-202ENST00000425692 1426 ntBASIC14.56□□□□□ -0.08
NUP35Q8NFH5 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
NUP35Q8NFH5 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.55□□□□□ -0.08
NUP35Q8NFH5 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms