Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
DNAAF1Q8NEP3 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 RARRES2P6-201ENST00000567333 442 ntBASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 BID-214ENST00000617586 542 ntTSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 AC008694.1-202ENST00000636953 945 ntBASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 LINC01465-201ENST00000408887 1940 ntBASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
DNAAF1Q8NEP3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 AC005082.1-201ENST00000413042 2259 ntBASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.12■□□□□ 0.33
DNAAF1Q8NEP3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 METTL26-203ENST00000397664 604 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 CYP2T3P-201ENST00000601990 817 ntBASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 AL031963.3-201ENST00000606441 850 ntBASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 OR10C1-204ENST00000622521 1039 ntBASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 KRT16P6-202ENST00000425692 1426 ntBASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DNAAF1Q8NEP3 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DNAAF1Q8NEP3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms