Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CPSF7Q8N684 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.05■□□□□ 0.64
CPSF7Q8N684 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 AL512625.2-201ENST00000417533 625 ntBASIC19.04■□□□□ 0.64
CPSF7Q8N684 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 TSPY20P-201ENST00000450910 630 ntBASIC19.04■□□□□ 0.64
CPSF7Q8N684 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 AL031963.3-201ENST00000606441 850 ntBASIC19.04■□□□□ 0.64
CPSF7Q8N684 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CPSF7Q8N684 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CPSF7Q8N684 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CPSF7Q8N684 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CPSF7Q8N684 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 BX276092.2-201ENST00000417668 665 ntBASIC19.02■□□□□ 0.64
CPSF7Q8N684 PPP1R14BP2-201ENST00000426284 444 ntBASIC19.02■□□□□ 0.64
CPSF7Q8N684 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 AL162412.1-201ENST00000567129 965 ntBASIC19.02■□□□□ 0.64
CPSF7Q8N684 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CPSF7Q8N684 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CPSF7Q8N684 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPSF7Q8N684 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CPSF7Q8N684 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.02■□□□□ 0.63
CPSF7Q8N684 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 KRT8P20-201ENST00000423953 1409 ntBASIC19.01■□□□□ 0.63
CPSF7Q8N684 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 RARRES2P4-201ENST00000514074 484 ntBASIC19.01■□□□□ 0.63
CPSF7Q8N684 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 MIR4651-201ENST00000582622 73 ntBASIC19.01■□□□□ 0.63
CPSF7Q8N684 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CPSF7Q8N684 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CPSF7Q8N684 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms