Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHPFQ8IZ52 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 KRT18P57-201ENST00000443599 1254 ntBASIC19.86■□□□□ 0.77
CHPFQ8IZ52 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 C2orf69P3-201ENST00000565542 1120 ntBASIC19.86■□□□□ 0.77
CHPFQ8IZ52 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 AL445228.2-201ENST00000605589 952 ntBASIC19.86■□□□□ 0.77
CHPFQ8IZ52 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHPFQ8IZ52 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 CRYGFP-201ENST00000418459 633 ntBASIC19.85■□□□□ 0.77
CHPFQ8IZ52 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 AC097488.1-201ENST00000507834 756 ntBASIC19.85■□□□□ 0.77
CHPFQ8IZ52 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.85■□□□□ 0.77
CHPFQ8IZ52 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 BX119927.1-201ENST00000636596 1552 ntBASIC19.84■□□□□ 0.77
CHPFQ8IZ52 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 SLC25A3P1-201ENST00000443844 931 ntBASIC19.84■□□□□ 0.77
CHPFQ8IZ52 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 AP005242.2-201ENST00000580065 1175 ntBASIC19.84■□□□□ 0.77
CHPFQ8IZ52 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
CHPFQ8IZ52 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 AC092667.1-201ENST00000434301 2586 ntBASIC19.83■□□□□ 0.77
CHPFQ8IZ52 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 TERF1P1-201ENST00000311003 1181 ntBASIC19.83■□□□□ 0.77
CHPFQ8IZ52 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.83■□□□□ 0.77
CHPFQ8IZ52 AL590326.2-201ENST00000625139 305 ntBASIC19.83■□□□□ 0.77
CHPFQ8IZ52 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHPFQ8IZ52 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHPFQ8IZ52 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CHPFQ8IZ52 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms