Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 AP000974.1-201ENST00000623909 2387 ntBASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CCDC50Q8IVM0 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 GPX1P1-201ENST00000388829 606 ntBASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 CDCA4P2-201ENST00000441182 718 ntBASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 AL050303.2-201ENST00000619798 666 ntBASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 AC004408.2-201ENST00000623613 2777 ntBASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CCDC50Q8IVM0 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
CCDC50Q8IVM0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 AC026185.1-201ENST00000445748 174 ntBASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CCDC50Q8IVM0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.52■□□□□ 0.88
CCDC50Q8IVM0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC50Q8IVM0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CCDC50Q8IVM0 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms