Protein–RNA interactions for Protein: Q86YD7

FAM90A1, Protein FAM90A1, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM90A1Q86YD7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 KRT8P8-201ENST00000434750 1448 ntBASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
FAM90A1Q86YD7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 TUBB8P6-201ENST00000436895 1288 ntBASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 AC004264.1-201ENST00000608354 794 ntBASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
FAM90A1Q86YD7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
FAM90A1Q86YD7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 AL158211.5-201ENST00000623583 2518 ntBASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 KRT16P5-201ENST00000455284 522 ntBASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
FAM90A1Q86YD7 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC16.37■□□□□ 0.21
FAM90A1Q86YD7 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
FAM90A1Q86YD7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.37■□□□□ 0.21
FAM90A1Q86YD7 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms