Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 SNORA78-201ENST00000459373 127 ntBASIC17.19■□□□□ 0.34
RTTNQ86VV8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 AC012618.2-201ENST00000428058 849 ntBASIC17.19■□□□□ 0.34
RTTNQ86VV8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 SOX15-203ENST00000570788 1093 ntBASIC17.19■□□□□ 0.34
RTTNQ86VV8 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RTTNQ86VV8 HLA-B-256ENST00000639848 1089 ntBASIC17.19■□□□□ 0.34
RTTNQ86VV8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RTTNQ86VV8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 RCN1P1-201ENST00000400413 996 ntBASIC17.18■□□□□ 0.34
RTTNQ86VV8 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 FAM197Y4-202ENST00000622692 608 ntBASIC17.18■□□□□ 0.34
RTTNQ86VV8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.18■□□□□ 0.34
RTTNQ86VV8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RTTNQ86VV8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 AL359736.2-201ENST00000621992 437 ntBASIC17.17■□□□□ 0.34
RTTNQ86VV8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 CD37-204ENST00000535669 1674 ntTSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.17■□□□□ 0.34
RTTNQ86VV8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RTTNQ86VV8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RTTNQ86VV8 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.16■□□□□ 0.34
RTTNQ86VV8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms