Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LDB1Q86U70 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC19.46■□□□□ 0.71
LDB1Q86U70 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LDB1Q86U70 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
LDB1Q86U70 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LDB1Q86U70 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LDB1Q86U70 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.45■□□□□ 0.7
LDB1Q86U70 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
LDB1Q86U70 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.45■□□□□ 0.7
LDB1Q86U70 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.45■□□□□ 0.7
LDB1Q86U70 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.45■□□□□ 0.7
LDB1Q86U70 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.45■□□□□ 0.7
LDB1Q86U70 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
LDB1Q86U70 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
LDB1Q86U70 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.45■□□□□ 0.7
LDB1Q86U70 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
LDB1Q86U70 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LDB1Q86U70 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 AL032819.2-201ENST00000624543 2162 ntBASIC19.44■□□□□ 0.7
LDB1Q86U70 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.44■□□□□ 0.7
LDB1Q86U70 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.44■□□□□ 0.7
LDB1Q86U70 AP003097.1-201ENST00000530657 1135 ntBASIC19.44■□□□□ 0.7
LDB1Q86U70 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.44■□□□□ 0.7
LDB1Q86U70 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 AL121829.2-201ENST00000620908 328 ntBASIC19.44■□□□□ 0.7
LDB1Q86U70 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
LDB1Q86U70 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.44■□□□□ 0.7
LDB1Q86U70 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LDB1Q86U70 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LDB1Q86U70 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
LDB1Q86U70 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
LDB1Q86U70 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDB1Q86U70 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
LDB1Q86U70 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC19.43■□□□□ 0.7
LDB1Q86U70 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB1Q86U70 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB1Q86U70 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB1Q86U70 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
LDB1Q86U70 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
LDB1Q86U70 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
LDB1Q86U70 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
LDB1Q86U70 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
LDB1Q86U70 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.42■□□□□ 0.7
LDB1Q86U70 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
LDB1Q86U70 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LDB1Q86U70 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.42■□□□□ 0.7
LDB1Q86U70 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.42■□□□□ 0.7
LDB1Q86U70 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms