Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 GATM-206ENST00000558336 1522 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 AL356740.2-201ENST00000601559 647 ntBASIC10.5□□□□□ -0.73
LCA10Q71F78 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC10.5□□□□□ -0.73
LCA10Q71F78 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC10.5□□□□□ -0.73
LCA10Q71F78 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
LCA10Q71F78 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
LCA10Q71F78 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
LCA10Q71F78 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 SRD5A1P1-201ENST00000442297 786 ntBASIC10.49□□□□□ -0.73
LCA10Q71F78 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 AL034346.1-201ENST00000568244 1277 ntBASIC10.49□□□□□ -0.73
LCA10Q71F78 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.49□□□□□ -0.73
LCA10Q71F78 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
LCA10Q71F78 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
LCA10Q71F78 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LCA10Q71F78 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
LCA10Q71F78 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LCA10Q71F78 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
LCA10Q71F78 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
LCA10Q71F78 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC10.48□□□□□ -0.73
LCA10Q71F78 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
LCA10Q71F78 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
LCA10Q71F78 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms