Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RTL4Q6ZR62 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTL4Q6ZR62 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTL4Q6ZR62 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
RTL4Q6ZR62 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 AC110285.5-201ENST00000611501 352 ntBASIC18.26■□□□□ 0.51
RTL4Q6ZR62 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RTL4Q6ZR62 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 AL020996.1-203ENST00000536896 2307 ntBASIC18.25■□□□□ 0.51
RTL4Q6ZR62 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 AC008550.1-201ENST00000511500 884 ntBASIC18.25■□□□□ 0.51
RTL4Q6ZR62 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RTL4Q6ZR62 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 MIR718-201ENST00000390190 70 ntBASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RTL4Q6ZR62 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.23■□□□□ 0.51
RTL4Q6ZR62 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms