Protein–RNA interactions for Protein: Q63HN8

RNF213, E3 ubiquitin-protein ligase RNF213, humanhuman

Predictions only

Length 5,207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213Q63HN8 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
RNF213Q63HN8 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
RNF213Q63HN8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 COA5-202ENST00000409997 557 ntTSL 4 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC10.46□□□□□ -0.73
RNF213Q63HN8 DUX4L17-201ENST00000557360 1267 ntBASIC10.46□□□□□ -0.73
RNF213Q63HN8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
RNF213Q63HN8 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC10.46□□□□□ -0.74
RNF213Q63HN8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC10.46□□□□□ -0.74
RNF213Q63HN8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC10.46□□□□□ -0.74
RNF213Q63HN8 AC104109.2-201ENST00000602919 1418 ntBASIC10.46□□□□□ -0.74
RNF213Q63HN8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RNF213Q63HN8 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RNF213Q63HN8 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC10.46□□□□□ -0.74
RNF213Q63HN8 CHCHD2P8-201ENST00000429873 447 ntBASIC10.46□□□□□ -0.74
RNF213Q63HN8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
RNF213Q63HN8 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC10.46□□□□□ -0.74
RNF213Q63HN8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC10.46□□□□□ -0.74
RNF213Q63HN8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
RNF213Q63HN8 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 CD63-204ENST00000546939 779 ntTSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 METTL26-204ENST00000397665 558 ntTSL 2 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 LITAF-211ENST00000572255 516 ntTSL 4 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
RNF213Q63HN8 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 RBM7-207ENST00000544582 692 ntTSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
RNF213Q63HN8 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 SAPCD2P3-201ENST00000455031 850 ntBASIC10.44□□□□□ -0.74
RNF213Q63HN8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 AP005901.3-202ENST00000581653 237 ntBASIC10.44□□□□□ -0.74
RNF213Q63HN8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 HLA-A-209ENST00000638375 975 ntBASIC10.44□□□□□ -0.74
RNF213Q63HN8 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC10.44□□□□□ -0.74
RNF213Q63HN8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
RNF213Q63HN8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms