Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 DUSP5P1-201ENST00000441325 1139 ntBASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 AP003041.3-201ENST00000527151 707 ntBASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
LYSMD4Q5XG99 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 AP000523.1-201ENST00000398242 1049 ntBASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 AL450487.1-201ENST00000426799 995 ntBASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 PP7080-204ENST00000510714 601 ntTSL 3 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 CKBP1-201ENST00000565489 1086 ntBASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 AC069148.1-201ENST00000608741 768 ntBASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
LYSMD4Q5XG99 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 PRSS44-201ENST00000515154 1146 ntBASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 VENTXP5-201ENST00000523979 775 ntBASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 AC116407.4-201ENST00000623319 1061 ntBASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.16■□□□□ 0.66
LYSMD4Q5XG99 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LYSMD4Q5XG99 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms