Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 Telomerase-vert.1-201ENST00000363312 438 ntBASIC24.67■■□□□ 1.54
RC3H1Q5TC82 AC112907.2-201ENST00000448639 330 ntBASIC24.67■■□□□ 1.54
RC3H1Q5TC82 PP7080-204ENST00000510714 601 ntTSL 3 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
RC3H1Q5TC82 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 FXN-203ENST00000396366 922 ntTSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC24.66■■□□□ 1.54
RC3H1Q5TC82 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 LINC01465-201ENST00000408887 1940 ntBASIC24.66■■□□□ 1.54
RC3H1Q5TC82 AC079834.2-201ENST00000609776 1949 ntBASIC24.66■■□□□ 1.54
RC3H1Q5TC82 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
RC3H1Q5TC82 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 CLN6-214ENST00000636314 442 ntTSL 3 BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
RC3H1Q5TC82 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 ATP5G2P1-201ENST00000433580 426 ntBASIC24.64■■□□□ 1.54
RC3H1Q5TC82 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.64■■□□□ 1.54
RC3H1Q5TC82 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
RC3H1Q5TC82 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
RC3H1Q5TC82 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 WWC2-AS2-201ENST00000578387 2183 ntBASIC24.63■■□□□ 1.53
RC3H1Q5TC82 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC24.63■■□□□ 1.53
RC3H1Q5TC82 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 GCSHP2-201ENST00000560971 527 ntBASIC24.62■■□□□ 1.53
RC3H1Q5TC82 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC24.62■■□□□ 1.53
RC3H1Q5TC82 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H1Q5TC82 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
RC3H1Q5TC82 AC012676.1-201ENST00000574705 1949 ntBASIC24.61■■□□□ 1.53
RC3H1Q5TC82 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
RC3H1Q5TC82 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms