Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 AC133552.2-202ENST00000575694 574 ntBASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
ATP6AP1LQ52LC2 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP6AP1LQ52LC2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
ATP6AP1LQ52LC2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP6AP1LQ52LC2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
ATP6AP1LQ52LC2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
ATP6AP1LQ52LC2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 AC004911.1-201ENST00000416316 871 ntBASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 AC093503.3-201ENST00000624917 2352 ntBASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.83■□□□□ 0.6
ATP6AP1LQ52LC2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 AC022517.1-201ENST00000592429 346 ntBASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 MKRN4P-201ENST00000444706 1521 ntBASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ATP6AP1LQ52LC2 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ATP6AP1LQ52LC2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ATP6AP1LQ52LC2 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms