Protein–RNA interactions for Protein: P79483

HLA-DRB3, HLA class II histocompatibility antigen, DR beta 3 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB3P79483 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 AC004911.1-201ENST00000416316 871 ntBASIC16.31■□□□□ 0.2
HLA-DRB3P79483 AC133552.2-202ENST00000575694 574 ntBASIC16.31■□□□□ 0.2
HLA-DRB3P79483 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
HLA-DRB3P79483 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 LINC01465-201ENST00000408887 1940 ntBASIC16.3■□□□□ 0.2
HLA-DRB3P79483 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HLA-DRB3P79483 MKRN4P-201ENST00000444706 1521 ntBASIC16.29■□□□□ 0.2
HLA-DRB3P79483 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.29■□□□□ 0.2
HLA-DRB3P79483 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 AC022517.1-201ENST00000592429 346 ntBASIC16.29■□□□□ 0.2
HLA-DRB3P79483 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HLA-DRB3P79483 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms