Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.08■□□□□ 0.16
SRPXP78539 TERF1P2-201ENST00000583350 1212 ntBASIC16.08■□□□□ 0.16
SRPXP78539 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
SRPXP78539 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SRPXP78539 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SRPXP78539 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SRPXP78539 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SRPXP78539 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
SRPXP78539 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SRPXP78539 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SRPXP78539 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SRPXP78539 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
SRPXP78539 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
SRPXP78539 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.07■□□□□ 0.16
SRPXP78539 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC16.07■□□□□ 0.16
SRPXP78539 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
SRPXP78539 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.07■□□□□ 0.16
SRPXP78539 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 AL591742.1-201ENST00000604433 565 ntBASIC16.07■□□□□ 0.16
SRPXP78539 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC16.07■□□□□ 0.16
SRPXP78539 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 AC008406.3-201ENST00000620001 1374 ntBASIC16.07■□□□□ 0.16
SRPXP78539 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.07■□□□□ 0.16
SRPXP78539 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
SRPXP78539 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
SRPXP78539 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.07■□□□□ 0.16
SRPXP78539 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRPXP78539 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
SRPXP78539 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SRPXP78539 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 AL161938.1-201ENST00000569833 2180 ntBASIC16.06■□□□□ 0.16
SRPXP78539 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.06■□□□□ 0.16
SRPXP78539 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.06■□□□□ 0.16
SRPXP78539 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.06■□□□□ 0.16
SRPXP78539 COX20-201ENST00000366528 568 ntTSL 2 BASIC16.06■□□□□ 0.16
SRPXP78539 AL162412.1-201ENST00000567129 965 ntBASIC16.06■□□□□ 0.16
SRPXP78539 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRPXP78539 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
SRPXP78539 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
SRPXP78539 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
SRPXP78539 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SRPXP78539 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
SRPXP78539 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
SRPXP78539 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
SRPXP78539 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
SRPXP78539 AC141586.3-201ENST00000562166 1838 ntBASIC16.05■□□□□ 0.16
SRPXP78539 AC026471.1-201ENST00000564629 3026 ntBASIC16.05■□□□□ 0.16
SRPXP78539 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
SRPXP78539 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
SRPXP78539 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.05■□□□□ 0.16
SRPXP78539 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
SRPXP78539 AL031432.3-201ENST00000607698 485 ntBASIC16.05■□□□□ 0.16
SRPXP78539 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
SRPXP78539 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.05■□□□□ 0.16
SRPXP78539 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms