Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEP78395 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC19.64■□□□□ 0.73
PRAMEP78395 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.64■□□□□ 0.73
PRAMEP78395 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEP78395 AC120498.8-201ENST00000614275 531 ntBASIC19.64■□□□□ 0.73
PRAMEP78395 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.64■□□□□ 0.73
PRAMEP78395 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.64■□□□□ 0.73
PRAMEP78395 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
PRAMEP78395 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PRAMEP78395 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PRAMEP78395 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PRAMEP78395 AC120498.9-201ENST00000339021 3867 ntBASIC19.64■□□□□ 0.73
PRAMEP78395 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PRAMEP78395 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEP78395 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEP78395 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.63■□□□□ 0.73
PRAMEP78395 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEP78395 AC008687.6-201ENST00000596318 630 ntBASIC19.63■□□□□ 0.73
PRAMEP78395 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
PRAMEP78395 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PRAMEP78395 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC19.63■□□□□ 0.73
PRAMEP78395 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PRAMEP78395 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRAMEP78395 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAMEP78395 AC093484.2-201ENST00000580996 2166 ntBASIC19.62■□□□□ 0.73
PRAMEP78395 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PRAMEP78395 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAMEP78395 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.62■□□□□ 0.73
PRAMEP78395 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.62■□□□□ 0.73
PRAMEP78395 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
PRAMEP78395 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PRAMEP78395 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PRAMEP78395 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEP78395 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PRAMEP78395 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PRAMEP78395 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.61■□□□□ 0.73
PRAMEP78395 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.61■□□□□ 0.73
PRAMEP78395 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PRAMEP78395 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.61■□□□□ 0.73
PRAMEP78395 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC19.61■□□□□ 0.73
PRAMEP78395 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PRAMEP78395 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PRAMEP78395 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms