Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
HIST1H3AP68431 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.05■□□□□ 0.32
HIST1H3AP68431 KRT8P8-201ENST00000434750 1448 ntBASIC17.04■□□□□ 0.32
HIST1H3AP68431 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 AL032819.2-201ENST00000624543 2162 ntBASIC17.04■□□□□ 0.32
HIST1H3AP68431 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 BX323043.1-201ENST00000641006 1765 ntBASIC17.04■□□□□ 0.32
HIST1H3AP68431 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
HIST1H3AP68431 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HIST1H3AP68431 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 ZNF815P-204ENST00000434898 1737 ntBASIC17.03■□□□□ 0.32
HIST1H3AP68431 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HIST1H3AP68431 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.03■□□□□ 0.32
HIST1H3AP68431 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 AC026366.1-201ENST00000488803 879 ntBASIC17.02■□□□□ 0.32
HIST1H3AP68431 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 AP003097.1-201ENST00000530657 1135 ntBASIC17.02■□□□□ 0.32
HIST1H3AP68431 KRT18P6-201ENST00000555540 1265 ntBASIC17.02■□□□□ 0.32
HIST1H3AP68431 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.02■□□□□ 0.32
HIST1H3AP68431 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HIST1H3AP68431 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HIST1H3AP68431 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H3AP68431 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H3AP68431 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HIST1H3AP68431 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H3AP68431 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H3AP68431 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H3AP68431 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.02■□□□□ 0.31
HIST1H3AP68431 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HIST1H3AP68431 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
HIST1H3AP68431 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.01■□□□□ 0.31
HIST1H3AP68431 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HIST1H3AP68431 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms