Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
YBX1P67809 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.02■□□□□ 0.64
YBX1P67809 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.02■□□□□ 0.64
YBX1P67809 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
YBX1P67809 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
YBX1P67809 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
YBX1P67809 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.02■□□□□ 0.64
YBX1P67809 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.02■□□□□ 0.64
YBX1P67809 AL121829.2-201ENST00000620908 328 ntBASIC19.02■□□□□ 0.64
YBX1P67809 TMEM191A-211ENST00000637163 1067 ntBASIC19.02■□□□□ 0.64
YBX1P67809 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
YBX1P67809 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.02■□□□□ 0.64
YBX1P67809 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
YBX1P67809 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.02■□□□□ 0.63
YBX1P67809 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
YBX1P67809 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.02■□□□□ 0.63
YBX1P67809 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.01■□□□□ 0.63
YBX1P67809 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.01■□□□□ 0.63
YBX1P67809 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
YBX1P67809 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.01■□□□□ 0.63
YBX1P67809 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
YBX1P67809 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.01■□□□□ 0.63
YBX1P67809 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.01■□□□□ 0.63
YBX1P67809 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.01■□□□□ 0.63
YBX1P67809 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.01■□□□□ 0.63
YBX1P67809 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
YBX1P67809 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
YBX1P67809 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
YBX1P67809 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19■□□□□ 0.63
YBX1P67809 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19■□□□□ 0.63
YBX1P67809 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
YBX1P67809 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
YBX1P67809 F2R-202ENST00000505600 442 ntTSL 2 BASIC19■□□□□ 0.63
YBX1P67809 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19■□□□□ 0.63
YBX1P67809 C1QBPP2-201ENST00000528754 825 ntBASIC19■□□□□ 0.63
YBX1P67809 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19■□□□□ 0.63
YBX1P67809 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
YBX1P67809 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19■□□□□ 0.63
YBX1P67809 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19■□□□□ 0.63
YBX1P67809 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
YBX1P67809 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
YBX1P67809 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
YBX1P67809 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
YBX1P67809 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19■□□□□ 0.63
YBX1P67809 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19■□□□□ 0.63
YBX1P67809 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YBX1P67809 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.99■□□□□ 0.63
YBX1P67809 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YBX1P67809 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
YBX1P67809 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.99■□□□□ 0.63
YBX1P67809 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
YBX1P67809 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
YBX1P67809 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
YBX1P67809 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.99■□□□□ 0.63
YBX1P67809 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.99■□□□□ 0.63
YBX1P67809 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.99■□□□□ 0.63
YBX1P67809 RPPH1-201ENST00000516869 333 ntBASIC18.99■□□□□ 0.63
YBX1P67809 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.99■□□□□ 0.63
YBX1P67809 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms