Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SEC61A1P61619 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.03■□□□□ 0.32
SEC61A1P61619 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEC61A1P61619 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC61A1P61619 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC61A1P61619 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.02■□□□□ 0.32
SEC61A1P61619 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC61A1P61619 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
SEC61A1P61619 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC61A1P61619 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
SEC61A1P61619 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.02■□□□□ 0.32
SEC61A1P61619 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.02■□□□□ 0.32
SEC61A1P61619 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SEC61A1P61619 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.02■□□□□ 0.32
SEC61A1P61619 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC61A1P61619 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SEC61A1P61619 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SEC61A1P61619 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC61A1P61619 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC17.02■□□□□ 0.31
SEC61A1P61619 AC007613.1-201ENST00000572811 2597 ntBASIC17.02■□□□□ 0.31
SEC61A1P61619 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC61A1P61619 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC61A1P61619 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
SEC61A1P61619 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.02■□□□□ 0.31
SEC61A1P61619 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SEC61A1P61619 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.01■□□□□ 0.31
SEC61A1P61619 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SEC61A1P61619 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SEC61A1P61619 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
SEC61A1P61619 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SEC61A1P61619 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC17■□□□□ 0.31
SEC61A1P61619 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17■□□□□ 0.31
SEC61A1P61619 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17■□□□□ 0.31
SEC61A1P61619 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 NME6-213ENST00000451657 871 ntTSL 2 BASIC17■□□□□ 0.31
SEC61A1P61619 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17■□□□□ 0.31
SEC61A1P61619 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
SEC61A1P61619 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17■□□□□ 0.31
SEC61A1P61619 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC17■□□□□ 0.31
SEC61A1P61619 AC105020.6-201ENST00000621523 1217 ntBASIC17■□□□□ 0.31
SEC61A1P61619 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17■□□□□ 0.31
SEC61A1P61619 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
SEC61A1P61619 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17■□□□□ 0.31
SEC61A1P61619 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SEC61A1P61619 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SEC61A1P61619 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 AC005332.8-201ENST00000622750 2735 ntBASIC16.99■□□□□ 0.31
SEC61A1P61619 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.99■□□□□ 0.31
SEC61A1P61619 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.99■□□□□ 0.31
SEC61A1P61619 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SEC61A1P61619 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 271.8 ms