Protein–RNA interactions for Protein: P58876

HIST1H2BD, Histone H2B type 1-D, humanhuman

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2BDP58876 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 AC134043.2-201ENST00000624206 2238 ntBASIC14.75□□□□□ -0.05
HIST1H2BDP58876 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 MOK-225ENST00000522867 1883 ntTSL 5 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 AL645608.8-201ENST00000606034 2086 ntBASIC14.75□□□□□ -0.05
HIST1H2BDP58876 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 AL118508.1-201ENST00000613502 2345 ntBASIC14.75□□□□□ -0.05
HIST1H2BDP58876 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HIST1H2BDP58876 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 SPCS2P3-201ENST00000500401 656 ntBASIC14.74□□□□□ -0.05
HIST1H2BDP58876 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 AC120024.1-201ENST00000562672 995 ntBASIC14.74□□□□□ -0.05
HIST1H2BDP58876 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 MIR4281-201ENST00000580852 62 ntBASIC14.74□□□□□ -0.05
HIST1H2BDP58876 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 AC133552.2-201ENST00000619106 1032 ntBASIC14.74□□□□□ -0.05
HIST1H2BDP58876 AC068587.7-201ENST00000641602 218 ntBASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HIST1H2BDP58876 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 AC055733.4-201ENST00000638462 1354 ntBASIC14.73□□□□□ -0.05
HIST1H2BDP58876 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 DPP3P2-201ENST00000416030 1696 ntBASIC14.73□□□□□ -0.05
HIST1H2BDP58876 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
HIST1H2BDP58876 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.72□□□□□ -0.05
HIST1H2BDP58876 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
HIST1H2BDP58876 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H2BDP58876 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H2BDP58876 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC14.72□□□□□ -0.05
HIST1H2BDP58876 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms