Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC17.43■□□□□ 0.38
CLRN1P58418 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CLRN1P58418 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.43■□□□□ 0.38
CLRN1P58418 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.43■□□□□ 0.38
CLRN1P58418 AC120498.9-201ENST00000339021 3867 ntBASIC17.43■□□□□ 0.38
CLRN1P58418 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CLRN1P58418 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
CLRN1P58418 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CLRN1P58418 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 UNC93B4-201ENST00000505679 747 ntBASIC17.42■□□□□ 0.38
CLRN1P58418 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.42■□□□□ 0.38
CLRN1P58418 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.42■□□□□ 0.38
CLRN1P58418 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CLRN1P58418 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 AC116562.4-201ENST00000641316 2276 ntBASIC17.42■□□□□ 0.38
CLRN1P58418 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
CLRN1P58418 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 AP006587.1-201ENST00000534129 1502 ntBASIC17.42■□□□□ 0.38
CLRN1P58418 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CLRN1P58418 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.41■□□□□ 0.38
CLRN1P58418 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CLRN1P58418 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.41■□□□□ 0.38
CLRN1P58418 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.41■□□□□ 0.38
CLRN1P58418 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.41■□□□□ 0.38
CLRN1P58418 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.41■□□□□ 0.38
CLRN1P58418 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.41■□□□□ 0.38
CLRN1P58418 UNC93B5-201ENST00000530315 699 ntBASIC17.41■□□□□ 0.38
CLRN1P58418 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLRN1P58418 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC17.4■□□□□ 0.38
CLRN1P58418 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.4■□□□□ 0.38
CLRN1P58418 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.4■□□□□ 0.38
CLRN1P58418 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.4■□□□□ 0.38
CLRN1P58418 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.4■□□□□ 0.38
CLRN1P58418 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.4■□□□□ 0.38
CLRN1P58418 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLRN1P58418 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLRN1P58418 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
CLRN1P58418 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.4■□□□□ 0.38
CLRN1P58418 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.4■□□□□ 0.38
CLRN1P58418 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLRN1P58418 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLRN1P58418 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.38
CLRN1P58418 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLRN1P58418 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.39■□□□□ 0.38
CLRN1P58418 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLRN1P58418 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.39■□□□□ 0.38
CLRN1P58418 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLRN1P58418 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CLRN1P58418 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLRN1P58418 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLRN1P58418 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLRN1P58418 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLRN1P58418 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.39■□□□□ 0.37
CLRN1P58418 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLRN1P58418 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLRN1P58418 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CLRN1P58418 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms