Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
CDKN2DP55273 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.27■□□□□ 0.68
CDKN2DP55273 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC19.27■□□□□ 0.68
CDKN2DP55273 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.27■□□□□ 0.68
CDKN2DP55273 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.27■□□□□ 0.68
CDKN2DP55273 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CDKN2DP55273 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDKN2DP55273 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDKN2DP55273 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
CDKN2DP55273 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.27■□□□□ 0.67
CDKN2DP55273 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDKN2DP55273 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.27■□□□□ 0.67
CDKN2DP55273 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDKN2DP55273 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CDKN2DP55273 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDKN2DP55273 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN2DP55273 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2DP55273 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2DP55273 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CDKN2DP55273 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2DP55273 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
CDKN2DP55273 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKN2DP55273 UNC93B4-201ENST00000505679 747 ntBASIC19.26■□□□□ 0.67
CDKN2DP55273 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.26■□□□□ 0.67
CDKN2DP55273 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2DP55273 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.26■□□□□ 0.67
CDKN2DP55273 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.26■□□□□ 0.67
CDKN2DP55273 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2DP55273 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDKN2DP55273 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.26■□□□□ 0.67
CDKN2DP55273 ZNF815P-204ENST00000434898 1737 ntBASIC19.25■□□□□ 0.67
CDKN2DP55273 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.25■□□□□ 0.67
CDKN2DP55273 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 YBX1P10-201ENST00000444752 975 ntBASIC19.25■□□□□ 0.67
CDKN2DP55273 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.25■□□□□ 0.67
CDKN2DP55273 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CDKN2DP55273 AL121829.2-201ENST00000620908 328 ntBASIC19.25■□□□□ 0.67
CDKN2DP55273 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CDKN2DP55273 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDKN2DP55273 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDKN2DP55273 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
CDKN2DP55273 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDKN2DP55273 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDKN2DP55273 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
CDKN2DP55273 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
CDKN2DP55273 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 ID1-201ENST00000376105 1233 ntBASIC19.24■□□□□ 0.67
CDKN2DP55273 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.24■□□□□ 0.67
CDKN2DP55273 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
CDKN2DP55273 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.24■□□□□ 0.67
CDKN2DP55273 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CDKN2DP55273 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CDKN2DP55273 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms