Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.46■■□□□ 1.03
PMS1P54277 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PMS1P54277 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
PMS1P54277 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.46■■□□□ 1.03
PMS1P54277 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
PMS1P54277 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.46■■□□□ 1.03
PMS1P54277 INO80E-214ENST00000620599 515 ntTSL 2 BASIC21.46■■□□□ 1.03
PMS1P54277 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PMS1P54277 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PMS1P54277 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.45■■□□□ 1.03
PMS1P54277 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
PMS1P54277 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PMS1P54277 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.45■■□□□ 1.02
PMS1P54277 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.45■■□□□ 1.02
PMS1P54277 HLA-L-209ENST00000420110 1011 ntBASIC21.45■■□□□ 1.02
PMS1P54277 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.45■■□□□ 1.02
PMS1P54277 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
PMS1P54277 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PMS1P54277 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.45■■□□□ 1.02
PMS1P54277 PNN-205ENST00000556530 601 ntTSL 2 BASIC21.45■■□□□ 1.02
PMS1P54277 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
PMS1P54277 ZNF815P-204ENST00000434898 1737 ntBASIC21.45■■□□□ 1.02
PMS1P54277 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 AL049812.1-201ENST00000432563 2267 ntBASIC21.45■■□□□ 1.02
PMS1P54277 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
PMS1P54277 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.45■■□□□ 1.02
PMS1P54277 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
PMS1P54277 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.45■■□□□ 1.02
PMS1P54277 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.45■■□□□ 1.02
PMS1P54277 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PMS1P54277 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.44■■□□□ 1.02
PMS1P54277 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
PMS1P54277 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PMS1P54277 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.44■■□□□ 1.02
PMS1P54277 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.44■■□□□ 1.02
PMS1P54277 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC21.44■■□□□ 1.02
PMS1P54277 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC21.44■■□□□ 1.02
PMS1P54277 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
PMS1P54277 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
PMS1P54277 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
PMS1P54277 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.43■■□□□ 1.02
PMS1P54277 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 SDHAP1-207ENST00000440850 2000 ntBASIC21.43■■□□□ 1.02
PMS1P54277 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 AC093503.3-201ENST00000624917 2352 ntBASIC21.43■■□□□ 1.02
PMS1P54277 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 AL355802.2-201ENST00000402069 882 ntBASIC21.43■■□□□ 1.02
PMS1P54277 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.43■■□□□ 1.02
PMS1P54277 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.43■■□□□ 1.02
PMS1P54277 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.43■■□□□ 1.02
PMS1P54277 AC008687.6-201ENST00000596318 630 ntBASIC21.43■■□□□ 1.02
PMS1P54277 AL121906.2-201ENST00000621597 723 ntBASIC21.43■■□□□ 1.02
PMS1P54277 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
PMS1P54277 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
PMS1P54277 AP006587.1-201ENST00000534129 1502 ntBASIC21.43■■□□□ 1.02
PMS1P54277 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC21.43■■□□□ 1.02
PMS1P54277 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.43■■□□□ 1.02
PMS1P54277 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
PMS1P54277 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms