Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 KRT8P45-201ENST00000414328 1447 ntBASIC21.57■■□□□ 1.04
ACLYP53396 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ACLYP53396 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.57■■□□□ 1.04
ACLYP53396 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.57■■□□□ 1.04
ACLYP53396 CD81-212ENST00000526072 1172 ntTSL 5 BASIC21.57■■□□□ 1.04
ACLYP53396 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ACLYP53396 LINC01465-201ENST00000408887 1940 ntBASIC21.57■■□□□ 1.04
ACLYP53396 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.56■■□□□ 1.04
ACLYP53396 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACLYP53396 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
ACLYP53396 AC026396.1-201ENST00000419388 421 ntBASIC21.56■■□□□ 1.04
ACLYP53396 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ACLYP53396 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.56■■□□□ 1.04
ACLYP53396 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC21.56■■□□□ 1.04
ACLYP53396 CLEC4GP1-201ENST00000596555 870 ntBASIC21.56■■□□□ 1.04
ACLYP53396 AC069148.1-201ENST00000608741 768 ntBASIC21.56■■□□□ 1.04
ACLYP53396 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ACLYP53396 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.56■■□□□ 1.04
ACLYP53396 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACLYP53396 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ACLYP53396 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ACLYP53396 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACLYP53396 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ACLYP53396 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.55■■□□□ 1.04
ACLYP53396 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.55■■□□□ 1.04
ACLYP53396 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.55■■□□□ 1.04
ACLYP53396 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 VENTXP5-201ENST00000523979 775 ntBASIC21.55■■□□□ 1.04
ACLYP53396 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.55■■□□□ 1.04
ACLYP53396 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC21.55■■□□□ 1.04
ACLYP53396 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.55■■□□□ 1.04
ACLYP53396 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ACLYP53396 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ACLYP53396 KRT8P41-201ENST00000533985 1514 ntBASIC21.55■■□□□ 1.04
ACLYP53396 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ACLYP53396 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ACLYP53396 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACLYP53396 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACLYP53396 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC21.54■■□□□ 1.04
ACLYP53396 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC21.54■■□□□ 1.04
ACLYP53396 PP7080-204ENST00000510714 601 ntTSL 3 BASIC21.54■■□□□ 1.04
ACLYP53396 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.54■■□□□ 1.04
ACLYP53396 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ACLYP53396 AL136038.3-201ENST00000561909 1096 ntBASIC21.54■■□□□ 1.04
ACLYP53396 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.54■■□□□ 1.04
ACLYP53396 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.54■■□□□ 1.04
ACLYP53396 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC21.54■■□□□ 1.04
ACLYP53396 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
ACLYP53396 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.53■■□□□ 1.04
ACLYP53396 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ACLYP53396 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.53■■□□□ 1.04
ACLYP53396 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 BX119927.1-201ENST00000636596 1552 ntBASIC21.53■■□□□ 1.04
ACLYP53396 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
ACLYP53396 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.53■■□□□ 1.04
ACLYP53396 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ACLYP53396 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.53■■□□□ 1.04
ACLYP53396 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC21.53■■□□□ 1.04
ACLYP53396 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.53■■□□□ 1.04
ACLYP53396 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC21.53■■□□□ 1.04
ACLYP53396 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21.53■■□□□ 1.04
ACLYP53396 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.53■■□□□ 1.04
ACLYP53396 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
ACLYP53396 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
ACLYP53396 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ACLYP53396 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.53■■□□□ 1.04
ACLYP53396 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ACLYP53396 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.52■■□□□ 1.04
ACLYP53396 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ACLYP53396 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms