Protein–RNA interactions for Protein: P51686

CCR9, C-C chemokine receptor type 9, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9P51686 AC016769.1-201ENST00000409132 1010 ntBASIC17.16■□□□□ 0.34
CCR9P51686 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.16■□□□□ 0.34
CCR9P51686 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.16■□□□□ 0.34
CCR9P51686 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.16■□□□□ 0.34
CCR9P51686 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC17.16■□□□□ 0.34
CCR9P51686 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCR9P51686 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR9P51686 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CCR9P51686 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.16■□□□□ 0.34
CCR9P51686 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR9P51686 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CCR9P51686 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.15■□□□□ 0.34
CCR9P51686 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR9P51686 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 AC010980.2-201ENST00000587099 1412 ntBASIC17.15■□□□□ 0.34
CCR9P51686 AC007613.1-201ENST00000572811 2597 ntBASIC17.15■□□□□ 0.34
CCR9P51686 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR9P51686 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.15■□□□□ 0.34
CCR9P51686 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CCR9P51686 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.15■□□□□ 0.34
CCR9P51686 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CCR9P51686 AL355472.2-201ENST00000422958 438 ntBASIC17.15■□□□□ 0.34
CCR9P51686 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR9P51686 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.15■□□□□ 0.34
CCR9P51686 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 AC011767.1-201ENST00000617410 1153 ntBASIC17.15■□□□□ 0.34
CCR9P51686 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR9P51686 AC231657.2-201ENST00000624556 255 ntBASIC17.15■□□□□ 0.34
CCR9P51686 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.15■□□□□ 0.34
CCR9P51686 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR9P51686 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.15■□□□□ 0.34
CCR9P51686 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CCR9P51686 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CCR9P51686 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
CCR9P51686 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR9P51686 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.14■□□□□ 0.33
CCR9P51686 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CCR9P51686 AC006015.1-201ENST00000429970 570 ntBASIC17.14■□□□□ 0.33
CCR9P51686 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.14■□□□□ 0.33
CCR9P51686 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR9P51686 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.14■□□□□ 0.33
CCR9P51686 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.14■□□□□ 0.33
CCR9P51686 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.14■□□□□ 0.33
CCR9P51686 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
CCR9P51686 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
CCR9P51686 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
CCR9P51686 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCR9P51686 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.13■□□□□ 0.33
CCR9P51686 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCR9P51686 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.13■□□□□ 0.33
CCR9P51686 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.13■□□□□ 0.33
CCR9P51686 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CCR9P51686 AL512625.2-201ENST00000417533 625 ntBASIC17.13■□□□□ 0.33
CCR9P51686 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.13■□□□□ 0.33
CCR9P51686 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.13■□□□□ 0.33
CCR9P51686 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.13■□□□□ 0.33
CCR9P51686 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CCR9P51686 KRT18P5-201ENST00000436075 1291 ntBASIC17.13■□□□□ 0.33
CCR9P51686 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.13■□□□□ 0.33
CCR9P51686 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCR9P51686 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.13■□□□□ 0.33
CCR9P51686 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.13■□□□□ 0.33
CCR9P51686 AC116351.2-201ENST00000606540 1585 ntBASIC17.13■□□□□ 0.33
CCR9P51686 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCR9P51686 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms