Protein–RNA interactions for Protein: P48668

KRT6C, Keratin, type II cytoskeletal 6C, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6CP48668 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
KRT6CP48668 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
KRT6CP48668 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT6CP48668 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT6CP48668 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.89■□□□□ 0.61
KRT6CP48668 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 TSPY6P-201ENST00000448518 926 ntBASIC18.89■□□□□ 0.61
KRT6CP48668 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.89■□□□□ 0.61
KRT6CP48668 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT6CP48668 WT1-AS_3.1-201ENST00000613262 234 ntBASIC18.89■□□□□ 0.61
KRT6CP48668 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.89■□□□□ 0.61
KRT6CP48668 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
KRT6CP48668 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.89■□□□□ 0.61
KRT6CP48668 AL032819.2-201ENST00000624543 2162 ntBASIC18.89■□□□□ 0.61
KRT6CP48668 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
KRT6CP48668 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT6CP48668 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT6CP48668 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
KRT6CP48668 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
KRT6CP48668 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT6CP48668 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT6CP48668 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.88■□□□□ 0.61
KRT6CP48668 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT6CP48668 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT6CP48668 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
KRT6CP48668 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.88■□□□□ 0.61
KRT6CP48668 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.88■□□□□ 0.61
KRT6CP48668 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT6CP48668 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
KRT6CP48668 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.88■□□□□ 0.61
KRT6CP48668 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
KRT6CP48668 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
KRT6CP48668 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
KRT6CP48668 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.87■□□□□ 0.61
KRT6CP48668 GUSBP6-202ENST00000438529 1198 ntBASIC18.87■□□□□ 0.61
KRT6CP48668 AC097658.1-201ENST00000475555 843 ntBASIC18.87■□□□□ 0.61
KRT6CP48668 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT6CP48668 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.87■□□□□ 0.61
KRT6CP48668 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 AC006557.6-201ENST00000623071 864 ntBASIC18.87■□□□□ 0.61
KRT6CP48668 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRT6CP48668 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT6CP48668 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT6CP48668 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
KRT6CP48668 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT6CP48668 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC18.86■□□□□ 0.61
KRT6CP48668 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.86■□□□□ 0.61
KRT6CP48668 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
KRT6CP48668 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
KRT6CP48668 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
KRT6CP48668 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.85■□□□□ 0.61
KRT6CP48668 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms