Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 CRK-204ENST00000574295 1391 ntTSL 5 BASIC20.7■□□□□ 0.9
SSR1P43307 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SSR1P43307 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR1P43307 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
SSR1P43307 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR1P43307 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR1P43307 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SSR1P43307 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR1P43307 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR1P43307 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SSR1P43307 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.69■□□□□ 0.9
SSR1P43307 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.69■□□□□ 0.9
SSR1P43307 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SSR1P43307 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.68■□□□□ 0.9
SSR1P43307 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
SSR1P43307 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.68■□□□□ 0.9
SSR1P43307 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.68■□□□□ 0.9
SSR1P43307 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.68■□□□□ 0.9
SSR1P43307 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.68■□□□□ 0.9
SSR1P43307 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.68■□□□□ 0.9
SSR1P43307 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC20.68■□□□□ 0.9
SSR1P43307 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR1P43307 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SSR1P43307 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR1P43307 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SSR1P43307 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
SSR1P43307 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR1P43307 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR1P43307 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.67■□□□□ 0.9
SSR1P43307 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR1P43307 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SSR1P43307 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SSR1P43307 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR1P43307 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.66■□□□□ 0.9
SSR1P43307 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR1P43307 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR1P43307 AC093484.2-201ENST00000580996 2166 ntBASIC20.66■□□□□ 0.9
SSR1P43307 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
SSR1P43307 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR1P43307 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR1P43307 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.66■□□□□ 0.9
SSR1P43307 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
SSR1P43307 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.66■□□□□ 0.9
SSR1P43307 PFKL-212ENST00000628044 129 ntTSL 3 BASIC20.66■□□□□ 0.9
SSR1P43307 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSR1P43307 LETM1P2-201ENST00000597330 2178 ntBASIC20.66■□□□□ 0.9
SSR1P43307 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSR1P43307 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR1P43307 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR1P43307 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.65■□□□□ 0.9
SSR1P43307 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.65■□□□□ 0.9
SSR1P43307 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR1P43307 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR1P43307 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SSR1P43307 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SSR1P43307 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR1P43307 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SSR1P43307 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR1P43307 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SSR1P43307 AC018553.1-201ENST00000616682 1458 ntBASIC20.65■□□□□ 0.9
SSR1P43307 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SSR1P43307 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.65■□□□□ 0.9
SSR1P43307 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR1P43307 NCF1B-203ENST00000435988 1254 ntBASIC20.65■□□□□ 0.9
SSR1P43307 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms