Protein–RNA interactions for Protein: P35452

HOXD12, Homeobox protein Hox-D12, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD12P35452 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD12P35452 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
HOXD12P35452 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
HOXD12P35452 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19.46■□□□□ 0.71
HOXD12P35452 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.46■□□□□ 0.71
HOXD12P35452 UPK3BP1-201ENST00000428678 509 ntBASIC19.46■□□□□ 0.71
HOXD12P35452 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXD12P35452 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.46■□□□□ 0.71
HOXD12P35452 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 AC116562.4-202ENST00000641738 218 ntBASIC19.46■□□□□ 0.71
HOXD12P35452 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
HOXD12P35452 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
HOXD12P35452 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
HOXD12P35452 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
HOXD12P35452 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 TFP1-202ENST00000475455 1573 ntBASIC19.45■□□□□ 0.7
HOXD12P35452 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD12P35452 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD12P35452 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 SLC25A1P2-201ENST00000430693 912 ntBASIC19.45■□□□□ 0.7
HOXD12P35452 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.45■□□□□ 0.7
HOXD12P35452 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 CCR12P-201ENST00000446203 998 ntBASIC19.45■□□□□ 0.7
HOXD12P35452 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD12P35452 AC130371.2-201ENST00000619443 611 ntBASIC19.45■□□□□ 0.7
HOXD12P35452 MYC-208ENST00000641036 567 ntBASIC19.45■□□□□ 0.7
HOXD12P35452 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
HOXD12P35452 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.45■□□□□ 0.7
HOXD12P35452 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.45■□□□□ 0.7
HOXD12P35452 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
HOXD12P35452 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXD12P35452 AC026310.3-201ENST00000625186 2373 ntBASIC19.44■□□□□ 0.7
HOXD12P35452 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD12P35452 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
HOXD12P35452 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 RNF152P1-201ENST00000397754 604 ntBASIC19.44■□□□□ 0.7
HOXD12P35452 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.44■□□□□ 0.7
HOXD12P35452 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.44■□□□□ 0.7
HOXD12P35452 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD12P35452 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.44■□□□□ 0.7
HOXD12P35452 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
HOXD12P35452 AL049796.1-201ENST00000565336 1766 ntBASIC19.44■□□□□ 0.7
HOXD12P35452 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.44■□□□□ 0.7
HOXD12P35452 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 AC096733.2-201ENST00000609937 1394 ntBASIC19.44■□□□□ 0.7
HOXD12P35452 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
HOXD12P35452 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
HOXD12P35452 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 KRT16P6-202ENST00000425692 1426 ntBASIC19.43■□□□□ 0.7
HOXD12P35452 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD12P35452 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
HOXD12P35452 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.43■□□□□ 0.7
HOXD12P35452 SLC25A1P4-201ENST00000567977 778 ntBASIC19.43■□□□□ 0.7
HOXD12P35452 AC010653.2-201ENST00000623505 997 ntBASIC19.43■□□□□ 0.7
HOXD12P35452 AL358472.4-201ENST00000633140 710 ntBASIC19.43■□□□□ 0.7
HOXD12P35452 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD12P35452 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
HOXD12P35452 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
HOXD12P35452 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.43■□□□□ 0.7
HOXD12P35452 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD12P35452 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
HOXD12P35452 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.42■□□□□ 0.7
HOXD12P35452 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
HOXD12P35452 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms