Protein–RNA interactions for Protein: P35443

THBS4, Thrombospondin-4, humanhuman

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS4P35443 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.15■□□□□ 0.34
THBS4P35443 AL023875.1-201ENST00000640777 796 ntBASIC17.15■□□□□ 0.34
THBS4P35443 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
THBS4P35443 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.15■□□□□ 0.34
THBS4P35443 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.15■□□□□ 0.34
THBS4P35443 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
THBS4P35443 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.14■□□□□ 0.34
THBS4P35443 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.14■□□□□ 0.34
THBS4P35443 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
THBS4P35443 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.14■□□□□ 0.33
THBS4P35443 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS4P35443 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS4P35443 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.14■□□□□ 0.33
THBS4P35443 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.14■□□□□ 0.33
THBS4P35443 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.14■□□□□ 0.33
THBS4P35443 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
THBS4P35443 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
THBS4P35443 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
THBS4P35443 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
THBS4P35443 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
THBS4P35443 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS4P35443 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS4P35443 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS4P35443 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
THBS4P35443 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS4P35443 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS4P35443 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.13■□□□□ 0.33
THBS4P35443 AP006294.2-201ENST00000641667 209 ntBASIC17.13■□□□□ 0.33
THBS4P35443 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.13■□□□□ 0.33
THBS4P35443 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
THBS4P35443 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
THBS4P35443 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
THBS4P35443 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.13■□□□□ 0.33
THBS4P35443 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.12■□□□□ 0.33
THBS4P35443 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.12■□□□□ 0.33
THBS4P35443 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
THBS4P35443 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 AC239809.2-201ENST00000415381 517 ntBASIC17.12■□□□□ 0.33
THBS4P35443 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.12■□□□□ 0.33
THBS4P35443 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.12■□□□□ 0.33
THBS4P35443 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.12■□□□□ 0.33
THBS4P35443 UBE2SP1-201ENST00000450587 669 ntBASIC17.12■□□□□ 0.33
THBS4P35443 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.12■□□□□ 0.33
THBS4P35443 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.12■□□□□ 0.33
THBS4P35443 AC093827.2-201ENST00000512654 315 ntBASIC17.12■□□□□ 0.33
THBS4P35443 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.12■□□□□ 0.33
THBS4P35443 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.12■□□□□ 0.33
THBS4P35443 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.12■□□□□ 0.33
THBS4P35443 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.12■□□□□ 0.33
THBS4P35443 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.12■□□□□ 0.33
THBS4P35443 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
THBS4P35443 AL121829.2-201ENST00000620908 328 ntBASIC17.12■□□□□ 0.33
THBS4P35443 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms