Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC12P31275 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 TMPOP1-202ENST00000424642 1267 ntBASIC17.3■□□□□ 0.36
HOXC12P31275 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC12P31275 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
HOXC12P31275 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC12P31275 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.3■□□□□ 0.36
HOXC12P31275 RARRES2P10-201ENST00000564312 460 ntBASIC17.3■□□□□ 0.36
HOXC12P31275 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC12P31275 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
HOXC12P31275 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC12P31275 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.3■□□□□ 0.36
HOXC12P31275 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
HOXC12P31275 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
HOXC12P31275 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC12P31275 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 AL512408.1-201ENST00000569378 2000 ntBASIC17.3■□□□□ 0.36
HOXC12P31275 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
HOXC12P31275 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
HOXC12P31275 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 AC090340.1-201ENST00000620778 4980 ntBASIC17.29■□□□□ 0.36
HOXC12P31275 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC12P31275 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
HOXC12P31275 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC12P31275 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC12P31275 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 AC018553.1-201ENST00000616682 1458 ntBASIC17.29■□□□□ 0.36
HOXC12P31275 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.29■□□□□ 0.36
HOXC12P31275 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HOXC12P31275 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.29■□□□□ 0.36
HOXC12P31275 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HOXC12P31275 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
HOXC12P31275 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC17.29■□□□□ 0.36
HOXC12P31275 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 AP001271.2-201ENST00000624018 1556 ntBASIC17.28■□□□□ 0.36
HOXC12P31275 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC12P31275 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HOXC12P31275 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HOXC12P31275 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC12P31275 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC12P31275 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC12P31275 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC12P31275 KRT18P35-201ENST00000510488 1269 ntBASIC17.28■□□□□ 0.36
HOXC12P31275 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC12P31275 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC12P31275 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HOXC12P31275 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC12P31275 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.28■□□□□ 0.36
HOXC12P31275 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC12P31275 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC12P31275 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC12P31275 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC12P31275 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC17.28■□□□□ 0.36
HOXC12P31275 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC12P31275 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC12P31275 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC12P31275 LINC01006-201ENST00000333319 2292 ntBASIC17.27■□□□□ 0.36
HOXC12P31275 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC12P31275 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC12P31275 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HOXC12P31275 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
HOXC12P31275 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC12P31275 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC12P31275 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC12P31275 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.27■□□□□ 0.36
HOXC12P31275 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC12P31275 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms