Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.36■■□□□ 1.01
HOXC8P31273 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
HOXC8P31273 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.36■■□□□ 1.01
HOXC8P31273 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 CD70-202ENST00000423145 881 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC8P31273 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC21.36■■□□□ 1.01
HOXC8P31273 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.36■■□□□ 1.01
HOXC8P31273 COX11P1-201ENST00000489116 835 ntBASIC21.36■■□□□ 1.01
HOXC8P31273 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC8P31273 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC21.36■■□□□ 1.01
HOXC8P31273 LINC01238-205ENST00000567549 1107 ntBASIC21.36■■□□□ 1.01
HOXC8P31273 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC21.36■■□□□ 1.01
HOXC8P31273 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.36■■□□□ 1.01
HOXC8P31273 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC8P31273 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
HOXC8P31273 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.36■■□□□ 1.01
HOXC8P31273 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC8P31273 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC8P31273 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC8P31273 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC8P31273 AL031133.1-201ENST00000406807 723 ntBASIC21.35■■□□□ 1.01
HOXC8P31273 TSPY5P-201ENST00000426936 936 ntBASIC21.35■■□□□ 1.01
HOXC8P31273 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC8P31273 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.35■■□□□ 1.01
HOXC8P31273 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC8P31273 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC8P31273 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.35■■□□□ 1.01
HOXC8P31273 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.35■■□□□ 1.01
HOXC8P31273 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC8P31273 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC8P31273 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
HOXC8P31273 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
HOXC8P31273 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.35■■□□□ 1.01
HOXC8P31273 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
HOXC8P31273 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC21.34■■□□□ 1.01
HOXC8P31273 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.34■■□□□ 1.01
HOXC8P31273 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.34■■□□□ 1.01
HOXC8P31273 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.34■■□□□ 1.01
HOXC8P31273 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
HOXC8P31273 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC21.34■■□□□ 1.01
HOXC8P31273 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HOXC8P31273 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
HOXC8P31273 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
HOXC8P31273 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
HOXC8P31273 GABARAPL3-202ENST00000624044 1851 ntBASIC21.33■■□□□ 1.01
HOXC8P31273 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.33■■□□□ 1.01
HOXC8P31273 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC21.33■■□□□ 1.01
HOXC8P31273 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
HOXC8P31273 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.33■■□□□ 1.01
HOXC8P31273 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
HOXC8P31273 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC8P31273 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.33■■□□□ 1
HOXC8P31273 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
HOXC8P31273 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
HOXC8P31273 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
HOXC8P31273 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.32■■□□□ 1
HOXC8P31273 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
HOXC8P31273 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 KRT8P11-201ENST00000409686 1436 ntBASIC21.32■■□□□ 1
HOXC8P31273 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.32■■□□□ 1
HOXC8P31273 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.32■■□□□ 1
HOXC8P31273 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.32■■□□□ 1
HOXC8P31273 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC21.32■■□□□ 1
HOXC8P31273 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.32■■□□□ 1
HOXC8P31273 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
HOXC8P31273 AL512604.3-201ENST00000569583 964 ntBASIC21.32■■□□□ 1
HOXC8P31273 AC011558.1-201ENST00000623459 338 ntBASIC21.32■■□□□ 1
HOXC8P31273 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.32■■□□□ 1
HOXC8P31273 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.32■■□□□ 1
HOXC8P31273 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.32■■□□□ 1
HOXC8P31273 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
HOXC8P31273 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.32■■□□□ 1
HOXC8P31273 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
HOXC8P31273 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms