Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.69■□□□□ 0.74
XPAP23025 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
XPAP23025 AC073195.1-201ENST00000607241 877 ntBASIC19.69■□□□□ 0.74
XPAP23025 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
XPAP23025 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
XPAP23025 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.69■□□□□ 0.74
XPAP23025 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.69■□□□□ 0.74
XPAP23025 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
XPAP23025 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
XPAP23025 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
XPAP23025 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.68■□□□□ 0.74
XPAP23025 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.68■□□□□ 0.74
XPAP23025 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 AC113410.3-201ENST00000623366 203 ntBASIC19.68■□□□□ 0.74
XPAP23025 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 KRT17P2-201ENST00000300992 1314 ntBASIC19.68■□□□□ 0.74
XPAP23025 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 TMEM179-206ENST00000616017 1645 ntBASIC19.68■□□□□ 0.74
XPAP23025 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
XPAP23025 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.68■□□□□ 0.74
XPAP23025 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
XPAP23025 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.67■□□□□ 0.74
XPAP23025 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
XPAP23025 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.67■□□□□ 0.74
XPAP23025 AC009237.14-201ENST00000609975 1594 ntBASIC19.67■□□□□ 0.74
XPAP23025 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.67■□□□□ 0.74
XPAP23025 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.67■□□□□ 0.74
XPAP23025 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 TSPY7P-201ENST00000431358 1114 ntBASIC19.67■□□□□ 0.74
XPAP23025 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.67■□□□□ 0.74
XPAP23025 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 C1QL1P1-201ENST00000568105 661 ntBASIC19.67■□□□□ 0.74
XPAP23025 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.67■□□□□ 0.74
XPAP23025 MIR4785-201ENST00000585005 73 ntBASIC19.67■□□□□ 0.74
XPAP23025 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.67■□□□□ 0.74
XPAP23025 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.67■□□□□ 0.74
XPAP23025 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.67■□□□□ 0.74
XPAP23025 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
XPAP23025 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
XPAP23025 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.66■□□□□ 0.74
XPAP23025 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
XPAP23025 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 FAM197Y1-201ENST00000421178 764 ntBASIC19.66■□□□□ 0.74
XPAP23025 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
XPAP23025 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.66■□□□□ 0.74
XPAP23025 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.66■□□□□ 0.74
XPAP23025 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.66■□□□□ 0.74
XPAP23025 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.66■□□□□ 0.74
XPAP23025 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.66■□□□□ 0.74
XPAP23025 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.66■□□□□ 0.74
XPAP23025 CD177P1-201ENST00000606252 935 ntBASIC19.66■□□□□ 0.74
XPAP23025 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.66■□□□□ 0.74
XPAP23025 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
XPAP23025 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.65■□□□□ 0.74
XPAP23025 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
XPAP23025 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
XPAP23025 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms