Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.8■□□□□ 0.28
CCL1P22362 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 AP006587.1-201ENST00000534129 1502 ntBASIC16.8■□□□□ 0.28
CCL1P22362 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCL1P22362 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL1P22362 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.8■□□□□ 0.28
CCL1P22362 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCL1P22362 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 KRT8P8-201ENST00000434750 1448 ntBASIC16.79■□□□□ 0.28
CCL1P22362 AC104417.2-201ENST00000562989 1793 ntBASIC16.79■□□□□ 0.28
CCL1P22362 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.79■□□□□ 0.28
CCL1P22362 AC097658.1-201ENST00000475555 843 ntBASIC16.79■□□□□ 0.28
CCL1P22362 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 AC060766.5-201ENST00000590539 871 ntBASIC16.79■□□□□ 0.28
CCL1P22362 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.79■□□□□ 0.28
CCL1P22362 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.79■□□□□ 0.28
CCL1P22362 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCL1P22362 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL1P22362 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL1P22362 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 PNMA6B-201ENST00000538162 1200 ntBASIC16.78■□□□□ 0.28
CCL1P22362 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.78■□□□□ 0.28
CCL1P22362 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.78■□□□□ 0.28
CCL1P22362 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CCL1P22362 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL1P22362 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
CCL1P22362 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
CCL1P22362 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.78■□□□□ 0.28
CCL1P22362 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCL1P22362 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
CCL1P22362 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL1P22362 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL1P22362 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL1P22362 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL1P22362 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCL1P22362 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL1P22362 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.77■□□□□ 0.28
CCL1P22362 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.77■□□□□ 0.28
CCL1P22362 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL1P22362 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL1P22362 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.77■□□□□ 0.28
CCL1P22362 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.77■□□□□ 0.28
CCL1P22362 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.77■□□□□ 0.27
CCL1P22362 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms