Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.33■□□□□ 0.68
BCKDHBP21953 KRT18P38-201ENST00000449496 1282 ntBASIC19.33■□□□□ 0.68
BCKDHBP21953 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.33■□□□□ 0.68
BCKDHBP21953 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.33■□□□□ 0.68
BCKDHBP21953 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.33■□□□□ 0.68
BCKDHBP21953 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.33■□□□□ 0.68
BCKDHBP21953 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
BCKDHBP21953 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.33■□□□□ 0.68
BCKDHBP21953 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.33■□□□□ 0.68
BCKDHBP21953 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.32■□□□□ 0.68
BCKDHBP21953 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BCKDHBP21953 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.32■□□□□ 0.68
BCKDHBP21953 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 AL160286.2-201ENST00000567150 934 ntBASIC19.32■□□□□ 0.68
BCKDHBP21953 AC140113.3-201ENST00000605663 199 ntBASIC19.32■□□□□ 0.68
BCKDHBP21953 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.32■□□□□ 0.68
BCKDHBP21953 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
BCKDHBP21953 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
BCKDHBP21953 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.32■□□□□ 0.68
BCKDHBP21953 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BCKDHBP21953 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.32■□□□□ 0.68
BCKDHBP21953 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
BCKDHBP21953 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 AC005332.1-201ENST00000577698 1310 ntBASIC19.31■□□□□ 0.68
BCKDHBP21953 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
BCKDHBP21953 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BCKDHBP21953 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.31■□□□□ 0.68
BCKDHBP21953 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.31■□□□□ 0.68
BCKDHBP21953 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.31■□□□□ 0.68
BCKDHBP21953 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
BCKDHBP21953 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 AL031432.5-201ENST00000641059 760 ntBASIC19.31■□□□□ 0.68
BCKDHBP21953 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.31■□□□□ 0.68
BCKDHBP21953 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.31■□□□□ 0.68
BCKDHBP21953 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
BCKDHBP21953 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BCKDHBP21953 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.3■□□□□ 0.68
BCKDHBP21953 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BCKDHBP21953 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.3■□□□□ 0.68
BCKDHBP21953 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
BCKDHBP21953 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BCKDHBP21953 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.3■□□□□ 0.68
BCKDHBP21953 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.3■□□□□ 0.68
BCKDHBP21953 AP003041.3-201ENST00000527151 707 ntBASIC19.3■□□□□ 0.68
BCKDHBP21953 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.3■□□□□ 0.68
BCKDHBP21953 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.3■□□□□ 0.68
BCKDHBP21953 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.3■□□□□ 0.68
BCKDHBP21953 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BCKDHBP21953 CLDN5-201ENST00000403084 2357 ntBASIC19.29■□□□□ 0.68
BCKDHBP21953 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
BCKDHBP21953 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.29■□□□□ 0.68
BCKDHBP21953 KRT8P45-201ENST00000414328 1447 ntBASIC19.29■□□□□ 0.68
BCKDHBP21953 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.29■□□□□ 0.68
BCKDHBP21953 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 AL512604.3-201ENST00000569583 964 ntBASIC19.29■□□□□ 0.68
BCKDHBP21953 AC116407.4-201ENST00000623319 1061 ntBASIC19.29■□□□□ 0.68
BCKDHBP21953 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
BCKDHBP21953 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BCKDHBP21953 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.28■□□□□ 0.68
BCKDHBP21953 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.28■□□□□ 0.68
BCKDHBP21953 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BCKDHBP21953 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms