Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ERCC3P19447 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
ERCC3P19447 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ERCC3P19447 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
ERCC3P19447 AC010203.1-204ENST00000548782 407 ntBASIC22.57■■□□□ 1.2
ERCC3P19447 RMI2-205ENST00000576027 818 ntTSL 2 BASIC22.57■■□□□ 1.2
ERCC3P19447 AP005242.2-201ENST00000580065 1175 ntBASIC22.57■■□□□ 1.2
ERCC3P19447 DGCR10-201ENST00000609839 495 ntBASIC22.57■■□□□ 1.2
ERCC3P19447 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC22.57■■□□□ 1.2
ERCC3P19447 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ERCC3P19447 GOLGA6L3-201ENST00000507199 1679 ntBASIC22.57■■□□□ 1.2
ERCC3P19447 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ERCC3P19447 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.57■■□□□ 1.2
ERCC3P19447 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
ERCC3P19447 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
ERCC3P19447 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
ERCC3P19447 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
ERCC3P19447 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.56■■□□□ 1.2
ERCC3P19447 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
ERCC3P19447 AC104076.2-201ENST00000448912 469 ntBASIC22.56■■□□□ 1.2
ERCC3P19447 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.56■■□□□ 1.2
ERCC3P19447 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 TPM1-226ENST00000560959 925 ntTSL 2 BASIC22.56■■□□□ 1.2
ERCC3P19447 C2orf69P3-201ENST00000565542 1120 ntBASIC22.56■■□□□ 1.2
ERCC3P19447 CLN6-221ENST00000637494 765 ntTSL 5 BASIC22.56■■□□□ 1.2
ERCC3P19447 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.56■■□□□ 1.2
ERCC3P19447 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
ERCC3P19447 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC22.56■■□□□ 1.2
ERCC3P19447 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
ERCC3P19447 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
ERCC3P19447 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.56■■□□□ 1.2
ERCC3P19447 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.55■■□□□ 1.2
ERCC3P19447 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC22.55■■□□□ 1.2
ERCC3P19447 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERCC3P19447 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ERCC3P19447 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
ERCC3P19447 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC22.55■■□□□ 1.2
ERCC3P19447 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
ERCC3P19447 AC131212.4-201ENST00000623606 975 ntBASIC22.55■■□□□ 1.2
ERCC3P19447 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERCC3P19447 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC22.55■■□□□ 1.2
ERCC3P19447 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERCC3P19447 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
ERCC3P19447 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.54■■□□□ 1.2
ERCC3P19447 PHGDH-210ENST00000641115 1638 ntBASIC22.54■■□□□ 1.2
ERCC3P19447 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
ERCC3P19447 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
ERCC3P19447 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC22.54■■□□□ 1.2
ERCC3P19447 DUX4L26-201ENST00000489078 1255 ntBASIC22.54■■□□□ 1.2
ERCC3P19447 AC097488.1-201ENST00000507834 756 ntBASIC22.54■■□□□ 1.2
ERCC3P19447 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22.54■■□□□ 1.2
ERCC3P19447 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC22.54■■□□□ 1.2
ERCC3P19447 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.54■■□□□ 1.2
ERCC3P19447 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC22.54■■□□□ 1.2
ERCC3P19447 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
ERCC3P19447 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC22.53■■□□□ 1.2
ERCC3P19447 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
ERCC3P19447 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 TSPY14P-201ENST00000303979 915 ntBASIC22.53■■□□□ 1.2
ERCC3P19447 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 CRYGFP-201ENST00000418459 633 ntBASIC22.53■■□□□ 1.2
ERCC3P19447 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 ECEL1P2-202ENST00000465689 757 ntBASIC22.53■■□□□ 1.2
ERCC3P19447 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.53■■□□□ 1.2
ERCC3P19447 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
ERCC3P19447 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
ERCC3P19447 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
ERCC3P19447 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
ERCC3P19447 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
ERCC3P19447 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC22.52■■□□□ 1.2
ERCC3P19447 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
ERCC3P19447 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC22.52■■□□□ 1.2
ERCC3P19447 RNF146-204ENST00000476956 884 ntTSL 2 BASIC22.52■■□□□ 1.2
ERCC3P19447 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC22.52■■□□□ 1.2
ERCC3P19447 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC22.52■■□□□ 1.2
ERCC3P19447 EGLN1P1-201ENST00000531623 762 ntBASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms