Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFEP18615 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NELFEP18615 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFEP18615 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 AL596275.1-201ENST00000423464 877 ntBASIC19.25■□□□□ 0.67
NELFEP18615 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 AC124016.1-201ENST00000609552 612 ntBASIC19.25■□□□□ 0.67
NELFEP18615 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.25■□□□□ 0.67
NELFEP18615 AL023875.1-201ENST00000640777 796 ntBASIC19.25■□□□□ 0.67
NELFEP18615 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
NELFEP18615 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
NELFEP18615 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
NELFEP18615 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.25■□□□□ 0.67
NELFEP18615 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFEP18615 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NELFEP18615 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.24■□□□□ 0.67
NELFEP18615 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NELFEP18615 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 AC007225.1-201ENST00000566331 1836 ntBASIC19.24■□□□□ 0.67
NELFEP18615 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.24■□□□□ 0.67
NELFEP18615 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 AC239809.2-201ENST00000415381 517 ntBASIC19.24■□□□□ 0.67
NELFEP18615 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC19.24■□□□□ 0.67
NELFEP18615 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.24■□□□□ 0.67
NELFEP18615 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.24■□□□□ 0.67
NELFEP18615 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
NELFEP18615 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.24■□□□□ 0.67
NELFEP18615 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.24■□□□□ 0.67
NELFEP18615 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NELFEP18615 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NELFEP18615 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NELFEP18615 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.23■□□□□ 0.67
NELFEP18615 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.23■□□□□ 0.67
NELFEP18615 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.23■□□□□ 0.67
NELFEP18615 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.23■□□□□ 0.67
NELFEP18615 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NELFEP18615 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.23■□□□□ 0.67
NELFEP18615 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
NELFEP18615 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.22■□□□□ 0.67
NELFEP18615 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.22■□□□□ 0.67
NELFEP18615 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NELFEP18615 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.22■□□□□ 0.67
NELFEP18615 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.22■□□□□ 0.67
NELFEP18615 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
NELFEP18615 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NELFEP18615 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.22■□□□□ 0.67
NELFEP18615 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
NELFEP18615 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
NELFEP18615 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.22■□□□□ 0.67
NELFEP18615 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.22■□□□□ 0.67
NELFEP18615 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
NELFEP18615 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.22■□□□□ 0.67
NELFEP18615 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NELFEP18615 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.21■□□□□ 0.67
NELFEP18615 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NELFEP18615 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.21■□□□□ 0.67
NELFEP18615 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms