Protein–RNA interactions for Protein: P18428

LBP, Lipopolysaccharide-binding protein, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBPP18428 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LBPP18428 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBPP18428 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.83■□□□□ 0.6
LBPP18428 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LBPP18428 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LBPP18428 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LBPP18428 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.82■□□□□ 0.6
LBPP18428 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 AL138781.2-201ENST00000617896 1843 ntBASIC18.82■□□□□ 0.6
LBPP18428 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 AL512625.2-201ENST00000417533 625 ntBASIC18.82■□□□□ 0.6
LBPP18428 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.82■□□□□ 0.6
LBPP18428 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.82■□□□□ 0.6
LBPP18428 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LBPP18428 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.81■□□□□ 0.6
LBPP18428 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LBPP18428 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.81■□□□□ 0.6
LBPP18428 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.81■□□□□ 0.6
LBPP18428 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
LBPP18428 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.81■□□□□ 0.6
LBPP18428 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
LBPP18428 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LBPP18428 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LBPP18428 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.81■□□□□ 0.6
LBPP18428 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LBPP18428 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.8■□□□□ 0.6
LBPP18428 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LBPP18428 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
LBPP18428 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 AL161938.1-201ENST00000569833 2180 ntBASIC18.8■□□□□ 0.6
LBPP18428 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.8■□□□□ 0.6
LBPP18428 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LBPP18428 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.79■□□□□ 0.6
LBPP18428 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.79■□□□□ 0.6
LBPP18428 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
LBPP18428 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
LBPP18428 ME3-201ENST00000323418 1068 ntTSL 5 BASIC18.79■□□□□ 0.6
LBPP18428 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC18.79■□□□□ 0.6
LBPP18428 AC093787.1-201ENST00000450396 207 ntBASIC18.79■□□□□ 0.6
LBPP18428 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.79■□□□□ 0.6
LBPP18428 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms