Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.09■□□□□ 0.81
ERCC2P18074 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
ERCC2P18074 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ERCC2P18074 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC2P18074 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.08■□□□□ 0.81
ERCC2P18074 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
ERCC2P18074 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC2P18074 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC2P18074 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC2P18074 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC2P18074 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ERCC2P18074 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.08■□□□□ 0.81
ERCC2P18074 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
ERCC2P18074 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.08■□□□□ 0.81
ERCC2P18074 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.08■□□□□ 0.81
ERCC2P18074 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.08■□□□□ 0.81
ERCC2P18074 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.08■□□□□ 0.81
ERCC2P18074 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
ERCC2P18074 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.08■□□□□ 0.8
ERCC2P18074 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.08■□□□□ 0.8
ERCC2P18074 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.08■□□□□ 0.8
ERCC2P18074 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ERCC2P18074 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
ERCC2P18074 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
ERCC2P18074 AC007952.6-201ENST00000573168 2673 ntBASIC20.08■□□□□ 0.8
ERCC2P18074 AC003957.1-201ENST00000625108 2673 ntBASIC20.08■□□□□ 0.8
ERCC2P18074 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
ERCC2P18074 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.07■□□□□ 0.8
ERCC2P18074 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ERCC2P18074 KRT18P29-201ENST00000397031 1267 ntBASIC20.07■□□□□ 0.8
ERCC2P18074 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.07■□□□□ 0.8
ERCC2P18074 AC133681.1-201ENST00000465482 601 ntBASIC20.07■□□□□ 0.8
ERCC2P18074 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 C1QBPP2-201ENST00000528754 825 ntBASIC20.07■□□□□ 0.8
ERCC2P18074 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.07■□□□□ 0.8
ERCC2P18074 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.07■□□□□ 0.8
ERCC2P18074 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.07■□□□□ 0.8
ERCC2P18074 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.07■□□□□ 0.8
ERCC2P18074 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ERCC2P18074 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
ERCC2P18074 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ERCC2P18074 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
ERCC2P18074 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ERCC2P18074 AC004264.1-201ENST00000608354 794 ntBASIC20.06■□□□□ 0.8
ERCC2P18074 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 Z82202.1-201ENST00000623446 1880 ntBASIC20.06■□□□□ 0.8
ERCC2P18074 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ERCC2P18074 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ERCC2P18074 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
ERCC2P18074 RPPH1-201ENST00000516869 333 ntBASIC20.05■□□□□ 0.8
ERCC2P18074 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.05■□□□□ 0.8
ERCC2P18074 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.05■□□□□ 0.8
ERCC2P18074 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms