Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A2P16615 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A2P16615 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP2A2P16615 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A2P16615 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A2P16615 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP2A2P16615 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.53■■□□□ 1.04
ATP2A2P16615 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP2A2P16615 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP2A2P16615 FAM87A-204ENST00000613235 858 ntBASIC21.53■■□□□ 1.04
ATP2A2P16615 AL445675.2-201ENST00000620291 557 ntBASIC21.53■■□□□ 1.04
ATP2A2P16615 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ATP2A2P16615 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP2A2P16615 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
ATP2A2P16615 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.53■■□□□ 1.04
ATP2A2P16615 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATP2A2P16615 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A2P16615 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A2P16615 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A2P16615 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ATP2A2P16615 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP2A2P16615 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP2A2P16615 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A2P16615 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC21.52■■□□□ 1.04
ATP2A2P16615 CRYGFP-201ENST00000418459 633 ntBASIC21.52■■□□□ 1.04
ATP2A2P16615 B3GAT3P1-201ENST00000471720 806 ntBASIC21.52■■□□□ 1.04
ATP2A2P16615 AC097488.1-201ENST00000507834 756 ntBASIC21.52■■□□□ 1.04
ATP2A2P16615 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
ATP2A2P16615 ABBA01031674.1-201ENST00000635145 728 ntBASIC21.52■■□□□ 1.04
ATP2A2P16615 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP2A2P16615 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP2A2P16615 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.52■■□□□ 1.04
ATP2A2P16615 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A2P16615 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A2P16615 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A2P16615 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
ATP2A2P16615 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ATP2A2P16615 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.03
ATP2A2P16615 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP2A2P16615 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP2A2P16615 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP2A2P16615 C1QL1P1-201ENST00000568105 661 ntBASIC21.51■■□□□ 1.03
ATP2A2P16615 AL121894.2-201ENST00000602977 491 ntBASIC21.51■■□□□ 1.03
ATP2A2P16615 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.51■■□□□ 1.03
ATP2A2P16615 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.51■■□□□ 1.03
ATP2A2P16615 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP2A2P16615 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP2A2P16615 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 LINC01521-201ENST00000504184 1943 ntBASIC21.51■■□□□ 1.03
ATP2A2P16615 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.51■■□□□ 1.03
ATP2A2P16615 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ATP2A2P16615 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
ATP2A2P16615 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
ATP2A2P16615 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
ATP2A2P16615 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A2P16615 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP2A2P16615 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A2P16615 KRT18P56-201ENST00000507275 550 ntBASIC21.5■■□□□ 1.03
ATP2A2P16615 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP2A2P16615 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A2P16615 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.5■■□□□ 1.03
ATP2A2P16615 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ATP2A2P16615 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
ATP2A2P16615 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A2P16615 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A2P16615 AL049796.1-201ENST00000565336 1766 ntBASIC21.49■■□□□ 1.03
ATP2A2P16615 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A2P16615 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.49■■□□□ 1.03
ATP2A2P16615 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP2A2P16615 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A2P16615 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A2P16615 INGX-201ENST00000359239 846 ntBASIC21.49■■□□□ 1.03
ATP2A2P16615 AC117947.1-201ENST00000427448 529 ntBASIC21.49■■□□□ 1.03
ATP2A2P16615 TPM4P1-201ENST00000436100 807 ntBASIC21.49■■□□□ 1.03
ATP2A2P16615 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
ATP2A2P16615 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.49■■□□□ 1.03
ATP2A2P16615 TOLLIP-AS1-201ENST00000530897 939 ntBASIC21.49■■□□□ 1.03
ATP2A2P16615 KRT126P-201ENST00000549467 1181 ntBASIC21.49■■□□□ 1.03
ATP2A2P16615 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC21.49■■□□□ 1.03
ATP2A2P16615 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.49■■□□□ 1.03
ATP2A2P16615 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
ATP2A2P16615 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms