Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
CCDC175P0C221 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC175P0C221 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC175P0C221 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC175P0C221 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC21.05■□□□□ 0.96
CCDC175P0C221 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC175P0C221 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC175P0C221 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC175P0C221 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 TERF1P5-201ENST00000477545 1207 ntBASIC21.04■□□□□ 0.96
CCDC175P0C221 KRT18P14-201ENST00000534205 1250 ntBASIC21.04■□□□□ 0.96
CCDC175P0C221 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC175P0C221 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC175P0C221 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC175P0C221 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC175P0C221 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC175P0C221 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC175P0C221 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC175P0C221 TEX21P-204ENST00000641479 1693 ntBASIC21.03■□□□□ 0.96
CCDC175P0C221 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC175P0C221 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.03■□□□□ 0.96
CCDC175P0C221 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC175P0C221 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CCDC175P0C221 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC175P0C221 AC016405.3-201ENST00000607710 860 ntBASIC21.03■□□□□ 0.96
CCDC175P0C221 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CCDC175P0C221 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC175P0C221 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC175P0C221 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC175P0C221 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
CCDC175P0C221 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.03■□□□□ 0.96
CCDC175P0C221 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CCDC175P0C221 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC175P0C221 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC21.02■□□□□ 0.96
CCDC175P0C221 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 AL390961.4-201ENST00000623958 2535 ntBASIC21.02■□□□□ 0.96
CCDC175P0C221 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC175P0C221 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
CCDC175P0C221 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 YBX1P1-201ENST00000445822 960 ntBASIC21.02■□□□□ 0.96
CCDC175P0C221 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.02■□□□□ 0.96
CCDC175P0C221 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
CCDC175P0C221 AC135050.7-201ENST00000624508 2218 ntBASIC21.02■□□□□ 0.96
CCDC175P0C221 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC175P0C221 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CCDC175P0C221 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCDC175P0C221 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC21.02■□□□□ 0.96
CCDC175P0C221 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC175P0C221 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.02■□□□□ 0.95
CCDC175P0C221 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCDC175P0C221 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
CCDC175P0C221 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC175P0C221 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCDC175P0C221 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC175P0C221 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC175P0C221 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC175P0C221 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC175P0C221 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC175P0C221 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.01■□□□□ 0.95
CCDC175P0C221 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC175P0C221 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CCDC175P0C221 MCRIP2P1-201ENST00000394346 511 ntBASIC21.01■□□□□ 0.95
CCDC175P0C221 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCDC175P0C221 MFSD11-216ENST00000590393 1141 ntBASIC21.01■□□□□ 0.95
CCDC175P0C221 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms