Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.76■□□□□ 0.75
COL4A2P08572 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.76■□□□□ 0.75
COL4A2P08572 AL512604.3-201ENST00000569583 964 ntBASIC19.76■□□□□ 0.75
COL4A2P08572 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.76■□□□□ 0.75
COL4A2P08572 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
COL4A2P08572 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COL4A2P08572 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.75■□□□□ 0.75
COL4A2P08572 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL4A2P08572 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
COL4A2P08572 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL4A2P08572 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.75■□□□□ 0.75
COL4A2P08572 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL4A2P08572 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
COL4A2P08572 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COL4A2P08572 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.75■□□□□ 0.75
COL4A2P08572 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.74■□□□□ 0.75
COL4A2P08572 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.74■□□□□ 0.75
COL4A2P08572 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 ZNF444P1-201ENST00000559497 298 ntBASIC19.74■□□□□ 0.75
COL4A2P08572 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A2P08572 NEK4P2-201ENST00000580004 1012 ntBASIC19.74■□□□□ 0.75
COL4A2P08572 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.74■□□□□ 0.75
COL4A2P08572 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
COL4A2P08572 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
COL4A2P08572 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COL4A2P08572 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A2P08572 KRT126P-201ENST00000549467 1181 ntBASIC19.73■□□□□ 0.75
COL4A2P08572 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
COL4A2P08572 HYMAI.1-201ENST00000620949 238 ntBASIC19.73■□□□□ 0.75
COL4A2P08572 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
COL4A2P08572 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.73■□□□□ 0.75
COL4A2P08572 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
COL4A2P08572 KRT8P11-201ENST00000409686 1436 ntBASIC19.73■□□□□ 0.75
COL4A2P08572 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A2P08572 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A2P08572 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 STARP1-201ENST00000397973 869 ntBASIC19.73■□□□□ 0.75
COL4A2P08572 AL450487.1-201ENST00000426799 995 ntBASIC19.73■□□□□ 0.75
COL4A2P08572 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
COL4A2P08572 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.73■□□□□ 0.75
COL4A2P08572 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A2P08572 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A2P08572 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
COL4A2P08572 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
COL4A2P08572 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.73■□□□□ 0.75
COL4A2P08572 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
COL4A2P08572 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
COL4A2P08572 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.72■□□□□ 0.75
COL4A2P08572 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.72■□□□□ 0.75
COL4A2P08572 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
COL4A2P08572 AC012313.10-201ENST00000623509 926 ntBASIC19.72■□□□□ 0.75
COL4A2P08572 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC19.72■□□□□ 0.75
COL4A2P08572 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
COL4A2P08572 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
COL4A2P08572 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
COL4A2P08572 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
COL4A2P08572 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
COL4A2P08572 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.71■□□□□ 0.75
COL4A2P08572 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
COL4A2P08572 VENTXP5-201ENST00000523979 775 ntBASIC19.71■□□□□ 0.75
COL4A2P08572 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms