Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.21■□□□□ 0.51
OPN1SWP03999 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OPN1SWP03999 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
OPN1SWP03999 LSM12P1-201ENST00000411836 588 ntBASIC18.21■□□□□ 0.51
OPN1SWP03999 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.21■□□□□ 0.51
OPN1SWP03999 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.21■□□□□ 0.51
OPN1SWP03999 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.21■□□□□ 0.51
OPN1SWP03999 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
OPN1SWP03999 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
OPN1SWP03999 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.21■□□□□ 0.51
OPN1SWP03999 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.21■□□□□ 0.51
OPN1SWP03999 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPN1SWP03999 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
OPN1SWP03999 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
OPN1SWP03999 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.2■□□□□ 0.5
OPN1SWP03999 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.2■□□□□ 0.5
OPN1SWP03999 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
OPN1SWP03999 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 GPX1P1-201ENST00000388829 606 ntBASIC18.2■□□□□ 0.5
OPN1SWP03999 AL512625.2-201ENST00000417533 625 ntBASIC18.2■□□□□ 0.5
OPN1SWP03999 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.2■□□□□ 0.5
OPN1SWP03999 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.2■□□□□ 0.5
OPN1SWP03999 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.2■□□□□ 0.5
OPN1SWP03999 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
OPN1SWP03999 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.2■□□□□ 0.5
OPN1SWP03999 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPN1SWP03999 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.2■□□□□ 0.5
OPN1SWP03999 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
OPN1SWP03999 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
OPN1SWP03999 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.19■□□□□ 0.5
OPN1SWP03999 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.19■□□□□ 0.5
OPN1SWP03999 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.19■□□□□ 0.5
OPN1SWP03999 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
OPN1SWP03999 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPN1SWP03999 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.18■□□□□ 0.5
OPN1SWP03999 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
OPN1SWP03999 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
OPN1SWP03999 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.18■□□□□ 0.5
OPN1SWP03999 AC116351.2-201ENST00000606540 1585 ntBASIC18.18■□□□□ 0.5
OPN1SWP03999 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.18■□□□□ 0.5
OPN1SWP03999 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.18■□□□□ 0.5
OPN1SWP03999 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPN1SWP03999 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms