Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CNOT4O95628 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.32■□□□□ 0.36
CNOT4O95628 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 KRT18P16-201ENST00000510337 1294 ntBASIC17.32■□□□□ 0.36
CNOT4O95628 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CNOT4O95628 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CNOT4O95628 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.31■□□□□ 0.36
CNOT4O95628 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.31■□□□□ 0.36
CNOT4O95628 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNOT4O95628 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 AC092667.1-201ENST00000434301 2586 ntBASIC17.31■□□□□ 0.36
CNOT4O95628 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.31■□□□□ 0.36
CNOT4O95628 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CNOT4O95628 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CNOT4O95628 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CNOT4O95628 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CNOT4O95628 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNOT4O95628 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.3■□□□□ 0.36
CNOT4O95628 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 KRT17P2-201ENST00000300992 1314 ntBASIC17.3■□□□□ 0.36
CNOT4O95628 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 HTR7P1-201ENST00000538670 1336 ntBASIC17.3■□□□□ 0.36
CNOT4O95628 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT4O95628 TUBB8P6-201ENST00000436895 1288 ntBASIC17.3■□□□□ 0.36
CNOT4O95628 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CNOT4O95628 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT4O95628 KRT18P21-201ENST00000515767 1272 ntBASIC17.3■□□□□ 0.36
CNOT4O95628 BX088651.1-201ENST00000540551 451 ntBASIC17.3■□□□□ 0.36
CNOT4O95628 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT4O95628 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.3■□□□□ 0.36
CNOT4O95628 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CNOT4O95628 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CNOT4O95628 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CNOT4O95628 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CNOT4O95628 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.29■□□□□ 0.36
CNOT4O95628 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.29■□□□□ 0.36
CNOT4O95628 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms