Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC30.51■■■□□ 2.47
PCF11O94913 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
PCF11O94913 TCF3P1-201ENST00000423021 1937 ntBASIC30.5■■■□□ 2.47
PCF11O94913 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCF11O94913 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
PCF11O94913 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC30.5■■■□□ 2.47
PCF11O94913 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCF11O94913 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCF11O94913 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
PCF11O94913 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC30.49■■■□□ 2.47
PCF11O94913 KRT18P56-201ENST00000507275 550 ntBASIC30.49■■■□□ 2.47
PCF11O94913 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC30.49■■■□□ 2.47
PCF11O94913 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC30.49■■■□□ 2.47
PCF11O94913 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC30.49■■■□□ 2.47
PCF11O94913 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC30.49■■■□□ 2.47
PCF11O94913 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
PCF11O94913 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC30.49■■■□□ 2.47
PCF11O94913 AC092338.2-201ENST00000568827 1415 ntBASIC30.49■■■□□ 2.47
PCF11O94913 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCF11O94913 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC30.48■■■□□ 2.47
PCF11O94913 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC30.48■■■□□ 2.47
PCF11O94913 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
PCF11O94913 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
PCF11O94913 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC30.48■■■□□ 2.47
PCF11O94913 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC30.48■■■□□ 2.47
PCF11O94913 DUSP5P1-201ENST00000441325 1139 ntBASIC30.48■■■□□ 2.47
PCF11O94913 AL391422.3-201ENST00000603791 2761 ntBASIC30.48■■■□□ 2.47
PCF11O94913 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCF11O94913 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PCF11O94913 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
PCF11O94913 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
PCF11O94913 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PCF11O94913 AC092667.1-201ENST00000434301 2586 ntBASIC30.47■■■□□ 2.47
PCF11O94913 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
PCF11O94913 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
PCF11O94913 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC30.47■■■□□ 2.47
PCF11O94913 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC30.46■■■□□ 2.47
PCF11O94913 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC30.46■■■□□ 2.47
PCF11O94913 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC30.46■■■□□ 2.47
PCF11O94913 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC30.46■■■□□ 2.47
PCF11O94913 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
PCF11O94913 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC30.46■■■□□ 2.47
PCF11O94913 AL023803.3-201ENST00000615559 522 ntBASIC30.46■■■□□ 2.47
PCF11O94913 AL138966.2-201ENST00000621997 464 ntBASIC30.46■■■□□ 2.47
PCF11O94913 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
PCF11O94913 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC30.46■■■□□ 2.47
PCF11O94913 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
PCF11O94913 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC30.45■■■□□ 2.47
PCF11O94913 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PCF11O94913 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PCF11O94913 SLC25A1P2-201ENST00000430693 912 ntBASIC30.45■■■□□ 2.47
PCF11O94913 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC30.45■■■□□ 2.47
PCF11O94913 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC30.45■■■□□ 2.47
PCF11O94913 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC30.45■■■□□ 2.47
PCF11O94913 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
PCF11O94913 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
PCF11O94913 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC30.45■■■□□ 2.47
PCF11O94913 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
PCF11O94913 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC30.45■■■□□ 2.47
PCF11O94913 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC30.45■■■□□ 2.47
PCF11O94913 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC30.45■■■□□ 2.46
PCF11O94913 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.45■■■□□ 2.46
PCF11O94913 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC30.45■■■□□ 2.46
PCF11O94913 CCR12P-201ENST00000446203 998 ntBASIC30.45■■■□□ 2.46
PCF11O94913 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC30.45■■■□□ 2.46
PCF11O94913 CKBP1-201ENST00000565489 1086 ntBASIC30.45■■■□□ 2.46
PCF11O94913 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC30.45■■■□□ 2.46
PCF11O94913 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC30.45■■■□□ 2.46
PCF11O94913 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.46
PCF11O94913 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCF11O94913 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC30.44■■■□□ 2.46
PCF11O94913 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCF11O94913 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
PCF11O94913 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
PCF11O94913 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC30.44■■■□□ 2.46
PCF11O94913 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
PCF11O94913 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
PCF11O94913 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
PCF11O94913 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC30.44■■■□□ 2.46
PCF11O94913 KRT18P48-201ENST00000434763 852 ntBASIC30.44■■■□□ 2.46
PCF11O94913 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC30.44■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms