Protein–RNA interactions for Protein: O75030

MITF, Microphthalmia-associated transcription factor, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MITFO75030 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MITFO75030 AC142381.2-201ENST00000566120 298 ntBASIC17.94■□□□□ 0.46
MITFO75030 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.94■□□□□ 0.46
MITFO75030 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.94■□□□□ 0.46
MITFO75030 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.94■□□□□ 0.46
MITFO75030 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MITFO75030 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MITFO75030 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.94■□□□□ 0.46
MITFO75030 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MITFO75030 WIZP1-201ENST00000531444 2299 ntBASIC17.93■□□□□ 0.46
MITFO75030 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.93■□□□□ 0.46
MITFO75030 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
MITFO75030 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MITFO75030 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MITFO75030 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.93■□□□□ 0.46
MITFO75030 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
MITFO75030 AL591742.1-201ENST00000604433 565 ntBASIC17.93■□□□□ 0.46
MITFO75030 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.93■□□□□ 0.46
MITFO75030 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.93■□□□□ 0.46
MITFO75030 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.93■□□□□ 0.46
MITFO75030 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.93■□□□□ 0.46
MITFO75030 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.93■□□□□ 0.46
MITFO75030 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.93■□□□□ 0.46
MITFO75030 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MITFO75030 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MITFO75030 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.93■□□□□ 0.46
MITFO75030 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
MITFO75030 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 KRT18P61-201ENST00000585825 1298 ntBASIC17.92■□□□□ 0.46
MITFO75030 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.92■□□□□ 0.46
MITFO75030 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 AC141586.3-201ENST00000562166 1838 ntBASIC17.92■□□□□ 0.46
MITFO75030 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.92■□□□□ 0.46
MITFO75030 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
MITFO75030 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
MITFO75030 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.92■□□□□ 0.46
MITFO75030 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.91■□□□□ 0.46
MITFO75030 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.91■□□□□ 0.46
MITFO75030 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.91■□□□□ 0.46
MITFO75030 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
MITFO75030 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 AC123595.1-201ENST00000440769 1046 ntBASIC17.91■□□□□ 0.46
MITFO75030 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.91■□□□□ 0.46
MITFO75030 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC17.91■□□□□ 0.46
MITFO75030 MYCNOS-205ENST00000641950 531 ntBASIC17.91■□□□□ 0.46
MITFO75030 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.91■□□□□ 0.46
MITFO75030 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.91■□□□□ 0.46
MITFO75030 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
MITFO75030 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.91■□□□□ 0.46
MITFO75030 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms