Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN1O60925 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PFDN1O60925 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
PFDN1O60925 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PFDN1O60925 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PFDN1O60925 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.49■□□□□ 0.39
PFDN1O60925 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN1O60925 STK25-204ENST00000405585 1643 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN1O60925 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.48■□□□□ 0.39
PFDN1O60925 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN1O60925 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN1O60925 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN1O60925 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.48■□□□□ 0.39
PFDN1O60925 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.48■□□□□ 0.39
PFDN1O60925 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
PFDN1O60925 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PFDN1O60925 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PFDN1O60925 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN1O60925 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PFDN1O60925 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
PFDN1O60925 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
PFDN1O60925 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC17.47■□□□□ 0.39
PFDN1O60925 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PFDN1O60925 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.47■□□□□ 0.39
PFDN1O60925 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PFDN1O60925 LINC01126-201ENST00000623515 1646 ntBASIC17.47■□□□□ 0.39
PFDN1O60925 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.46■□□□□ 0.39
PFDN1O60925 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
PFDN1O60925 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.46■□□□□ 0.39
PFDN1O60925 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
PFDN1O60925 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.46■□□□□ 0.39
PFDN1O60925 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PFDN1O60925 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
PFDN1O60925 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
PFDN1O60925 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PFDN1O60925 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PFDN1O60925 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms